Skip to contents

Ratio cluster plot.

Source: R/plot_functions.R
ratio_cluster_plot.Rd

Stacked bar plot of each cluster with the proportion of cells below/above the determined FSC.A/FSC.H ratio threshold.

Usage

ratio_cluster_plot(
  obj,
  clusters = "seurat_clusters",
  ratio = "ratio_anno",
  assay = "FACS"
)

Arguments

obj

The Seurat object.

clusters

The string of the meta.data column with the clustering resolution to plot.

ratio

The meta.data column with the classification of cells (ratio_high/ratio_low) determined using the FSC.A/FSC.H ratio and the determined threshold.

assay

The Seurat assay to use (default FACS).

Value

None